apt install -y git
apt install -y cmake
apt install -y python3 python3-ruamel.yaml python3-yaml python3-venv
apt install -y libomp-dev
apt install -y libboost-dev libboost-date-time-dev libboost-filesystem-dev libboost-serialization-dev libboost-program-options-dev
apt install -y netcdf-bin libnetcdf-dev libnetcdff-dev
apt install -y libatlas-base-dev
apt install -y liblapack-dev
apt install -y libeigen3-dev
apt install -y bison
apt install -y flex
apt install -y vim
apt install -y wget bc
## Install python3-pip and the dependencies to run
## plotscm.py with SCM output
apt install -y python3-pip
pip3 install numpy
pip3 install netcdf4
pip3 install matplotlib
pip3 install pandas
pip3 install xarray
## Download and build openmpi
https://download.open-mpi.org/release/open-mpi/v4.1/openmpi-4.1.5.tar.gz