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Note

Some of the versions in this list may already be the default for a specific package on a certain platform, so no changes will be made in those cases. After the update, all platforms will have the same defaults for all these packages.

PackageNext defaultNotes
boost1.61.0http://www.boost.org/users/history/version_1_61_0.html
cdo1.8.2

With Grib, netcdf 4, hdf5 and Magics support

https://code.zmaw.de/news/349

cmake3.10.2https://cmake.org/cmake/help/v3.10/release/3.10.html
gdal2.1.1https://trac.osgeo.org/gdal/wiki/Release/2.1.1-News
geos3.5.0https://trac.osgeo.org/geos/browser/tags/3.6.0/NEWS
git2.16.2https://github.com/git/git/tree/master/Documentation/RelNotes
gsl2.2.1http://git.savannah.gnu.org/cgit/gsl.git/tree/NEWS
hdf4.2.12https://support.hdfgroup.org/ftp/HDF/releases/HDF4.2.12/src/hdf-4.2.12-RELEASE.txt
hdf51.8.17https://support.hdfgroup.org/ftp/HDF5/releases/ReleaseFiles/hdf5-1.8.17-RELEASE.txt
nag24

A number of  a number of routines in the "G05 – 
Random Number Generators" chapter have been withdrawn.

https://www.nag.co.uk/numeric/fl/nagdoc_fl24/html/GENINT/replace.html

ncl6.4.0http://www.ncl.ucar.edu/prev_releases.shtml
nco4.6.7http://nco.sourceforge.net/ANNOUNCE
netcdf44.4.1http://www.unidata.ucar.edu/blogs/news/entry/netcdf-4-4-1
proj44.9.2https://github.com/OSGeo/proj.4/blob/4.9.2/ChangeLog
python2.7.12-01

More up-to-date extra python modules

MKL used for linear algebra in numpy and scipy

https://hg.python.org/cpython/raw-file/v2.7.12/Misc/NEWS

R3.3.1

More up-to-date extra R packages

MKL used for all linear algebra operations

https://cran.r-project.org/doc/manuals/r-release/NEWS.html

udunits2.2.17https://abi-laboratory.pro/tracker/changelog/udunits/2.2.17/log.html