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In the EUMETSAT section of the European Weather Cloud, there's now an instance equipped with the Data Tailor Standalone and EUMETSAT Data Access Client (EUMDAC) together, which includes all the currently available plugins on a Rocky Linux system.  Below, you'll find a guide that covers the provisioning, a minimal post-installation process, and usage instructions.

The Data Tailor is a product customization toolbox designed to enable users to tailor satellite data to their specific needs. It offers the ability to subset and aggregate data products across space and time, filter layers, generate quick looks, reproject data onto new coordinate reference systems, and reformat data into widely used Geographic Information System (GIS) formats such as netCDF and GeoTIFF, as well as image formats like JPEG and PNG. The Data Tailor can currently customize data from various satellite collections, including METOP, MSG, and Sentinel-3. There are two versions of the Data Tailor: the Data Tailor Web Service (DTWS) and the Data Tailor Standalone. The DTWS allows users to customize products in the EUMETSAT Data Store before downloading them. On the other hand, the Data Tailor Standalone is an application that can be installed on your machine, enabling you to customize downloaded products. Unlike the Data Tailor Web Services, which can be used with EUMDAC or via https://tailor.eumetsat.int, the standalone version is generally faster and does not have limitations such as maximum concurrent jobs or workspace size. For more information on capabilities of the Data Tailor, please refer to to Data Tailor Standalone Guide on User Portal and for more information about the available products and customisations inside the Data Tailor, please go to Products and Customisations Available in the Data Tailor page.

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Current limitations

Warning
  • The two Due to design of the Data Tailor plugins, epct_plugin_umarf and epct_plugin_netcdf_generator, are currently not available, hence they're not installed as default. We will put these plugins back in the installation as soon as they become available again.
  • Due to design of the software, only one linux user is able to use the software without additonal settings. When a user runs the application for the first time, various configuration files are created with permissions only editable by that user.

Installation

Provisioning

  • software, only one linux user is able to use the software without additional settings. When a user runs the application for the first time, various configuration files are created with permissions only editable by that user.

Installation

Provisioning

  1. Create the Data Tailor standalone instance by clicking on + ADD button on your Morpheus Dashboard.
  2. Search for Data Tailor Standalone, select it and click next.
    Image Added
  3. Choose a NAME for the instance type and move to next step.
    Image Added
  4.  Insert at least the following
  5. Create the Data Tailor standalone instance by clicking on + ADD button on your Morpheus Dashboard.
  6. Search for Data Tailor Standalone, select it and click next.
    Image Removed
  7. Choose a NAME for the instance type and move to next step.
    Image Removed
  8.  Insert at least the following inputs and click next:
    • layout: make sure it is rocky-datatailor
    • plan: select one with at least 16GB of RAM (e.g. eo2.xlarge)
    • network: private
    • security group: ssh
  9. Once done, click Complete and the provisioning will start.
  10. Look for the instance list (Provisioning → Instances) to check the status of itthe instance.
  11. Once ready you will see the green Running sign below the instance as below:

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  1. SSH into your instance following the Remote Access to the VM documentation. Alternatively, you can also use the console on Morpheus from your instance (Provisioning → Instances → select your instance and go to the Console section)
  2. Running the following commands you can verify if the installation was successful.
    Code Block
    languagebash
    titleCheck conda installation and dt_3_3 environmentCheck conda installation and epct-desktop environment
    $ conda env list
    # conda environments:
    #
    base                  *  /usr/local/miniconda
    epct-desktop             /usr/local/miniconda/envs/epct-desktop
  3. After confirming the installation, add conda environment to your shell and then restart it.
    Code Block
    languagebash
    titleIntegrate conda in your shell and restart your shell
    $ conda init
    no change     /usr/local/miniconda/condabin/conda
    no change     /usr/local/miniconda/bin/conda
    no change     /usr/local/miniconda/bin/conda-env
    no change     /usr/local/miniconda/bin/activate
    no change     /usr/local/miniconda/bin/deactivate
    no change     /usr/local/miniconda/etc/profile.d/conda.sh
    no change     /usr/local/miniconda/etc/fish/conf.d/conda.fish
    no change     /usr/local/miniconda/shell/condabin/Conda.psm1
    no change     /usr/local/miniconda/shell/condabin/conda-hook.ps1
    no change     /usr/local/miniconda/lib/python3.11/site-packages/xontrib/conda.xsh
    no change   $ conda env list
    # conda environments:
    #
    base                  *  /usr/local/miniconda
    dt_3_3                   /usr/local/miniconda/envs/dt_3_3
    After confirming the installation, add conda environment to your shell and then restart it
    /etc/profile.d/conda.csh
    modified      /home/USERNAME/.bashrc
    
    ==> For changes to take effect, close and re-open your current shell. <==
  4. After restarting your shell, you should be able to see that you're in base environment of conda.
    Code Block
    languagebash
    titleIntegrate conda in your shell and restart your shellActivate the conda environment and test the application
    (base) $ conda activate epct-desktop
    
    (epct-desktop) $ epct info
    epct_version: 3.4.0
    etc_dir:$ conda init
    no change     /usr/local/miniconda/condabin/conda
    no change     /usr/local/miniconda/bin/conda
    no change     /usr/local/miniconda/binenvs/conda-env
    no change    epct-desktop/etc/epct
    workspace_dir: /usr/local/miniconda/bin/activate
    no change    /envs/epct-desktop/var/cache/epct
    customisations_log_dir: /usr/local/miniconda/bin/deactivate
    no change     /usr/local/miniconda/etc/profile.d/conda.sh
    no change     /usr/local/miniconda/etc/fish/conf.d/conda.fish
    no change     /usr/local/miniconda/shell/condabin/Conda.psm1
    no change     /usr/local/miniconda/shell/condabin/conda-hook.ps1
    no change     /usr/local/miniconda/lib/python3.11/site-packages/xontrib/conda.xsh
    no change     /usr/local/miniconda/etc/profile.d/conda.csh
    modified      /home/USERNAME/.bashrc
    
    ==> For changes to take effect, close and re-open your current shell. <==
    After restarting your shell, you should be able to see that you're in base environment of conda.
    Code Block
    languagebash
    titleActivate the conda environment and test the application
    (base) $ conda activate dt_3_3
    
    (dt_3_3) $ epct info
    epct_version: 3.3.0
    etc_dir: /usr/local/miniconda/envs/dt_3_3/etc/epct
    workspace_dir: /usr/local/miniconda/envs/dt_3_3/var/cache/epct
    customisations_log_dir: /usr/local/miniconda/envs/dt_3_3/var/log/epct
    output_dir: /
    installed_plugins:
      - epct-plugin-ncarrays, 1.1.0
      - epct-plugin-gis, 3.2.0
    registered_backends:
      - epct_1d_array
      - epct_2d_array
      - epct_ascatl1szf
      - epct_eps_gome2l1b
      - epct_eps_grasl1
      - epct_eps_iasil1c
      - epct_eps_iasisnd02
      - epct_eps_native
      - epct_eps_native_gome2l1_iasisnd02
      - epct_gis
      - epct_gis_eps
      - epct_gis_eps_grib2
      - epct_gis_glbsst
      - epct_gis_glbsst_grib2
      - epct_gis_grib2
      - epct_gis_hrit
      - epct_gis_hrit_grib2
      - epct_gis_msg
      - epct_gis_msg_meteo_bufr
      - epct_or1sww025miniconda/envs/epct-desktop/var/log/epct
    output_dir: /
    installed_plugins:
      - epct-plugin-netcdf-generator, 3.1.1
      - epct-plugin-ncarrays, 1.1.0
      - epct-plugin-umarf, 3.2.0
      - epct-plugin-gis, 3.3.0
    registered_backends:
      - epct_1d_array
      - epct_2d_array
      - epct_ascatl1szf
      - epct_eps_gome2l1b
      - epct_eps_grasl1
      - epct_eps_iasil1c
      - epct_eps_iasisnd02
      - epct_eps_native
      - epct_eps_native_gome2l1_iasisnd02
      - epct_gis
      - epct_gis_eps
      - epct_gis_eps_grib2
      - epct_gis_fcil2
      - epct_gis_glbsst
      - epct_gis_glbsst_grib2
      - epct_gis_grib2
      - epct_gis_hrit
      - epct_gis_hrit_grib2
      - epct_gis_hrit_png_16_bit
      - epct_gis_msg
      - epct_gis_msg_meteo_bufr
      - epct_gis_msg_png_16_bit
      - epct_gis_mtgfcil1
      - epct_or1sww025
      - epct_plugin_netcdf_generator
      - epct_plugin_umarf_isccp
      - epct_plugin_umarf_isccp_nat
      - epct_plugin_umarf_msgclmk_grib
      - epct_plugin_umarf_msgclmk_netcdf
      - epct_plugin_umarf_msgnative
      - epct_plugin_umarf_msgnative_hrv_nat
      - epct_plugin_umarf_msgnative_nat
      - epct_plugin_umarf_openmtp
      - epct_plugin_umarf_rgb_dc_jpeg
      - epct_plugin_umarf_rgb_dc_jpeg_nat
      - epct_plugin_umarf_rgb_dc_png
      - epct_plugin_umarf_rgb_dc_png_nat
      - epct_plugin_umarf_xrit
      - epct_plugin_umarf_xrit_nat
    executable_paths:
      epct_plugin_netcdf_generator: null

The Data Tailor Standalone is ready to use. Whenever you want to use the application, just activate your conda environment with $ conda activate dt_3_3epct-desktop and run your customisations.

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  1. Activate the conda environment.
    Code Block
    languagebash
    titleActivate the conda environment
    (base) $ conda activate dt_3_3epct-desktop
    
  2. Create the chain.yaml
    Code Block
    languageyml
    titlechain.yaml
    product: HRSEVIRI
    format: netcdf4
    projection: geographic
    roi: western_europe
    filter:
      bands:
        - channel_9
        - channel_10
        - channel_11
  3. Run your customization customisation using the command below:
    Code Block
    languagebash
    titleRun chain
    (dt_3_3epct-desktop) $ epct run-chain -f chain.yaml MSG3-SEVI-MSG15-0100-NA-2024030711274220240613095742.143000000Z896000000Z-NA.zip
    2024-0306-0713 1110:3905:4625 - PROCESSING.chain_runner[286291] - INFO - Start process "39923ab44c15df87"
    2024-0306-0713 1110:3905:4625 - PROCESSING.chain_runner[236241] - INFO - WORKER: localhost
    2024-0306-0713 1110:3905:4625 - PROCESSING.chain_runner[237242] - INFO - PID: 18746417361
    2024-0306-0713 1110:3905:4625 - PROCESSING.chain_runner[238243] - INFO - backend: epct_gis_msg
    2024-0306-0713 1110:3905:4625 - PROCESSING.chain_runner[239244] - INFO - user: None
    2024-0306-0713 1110:3905:4928 - PROCESSING.preprocessing[612677] - INFO - Processing details - product: HRSEVIRI chain-name: None chain-details: -product: HRSEVIRI -format: NetCDF4 (simplified) -projection: Geographic / Plate-Carree -roi: Western Europe -filter: Custom
    2024-0306-0713 1110:3905:4928 - PROCESSING.preprocessing[618683] - INFO - ROI name: Western Europe - NSWE: [67, 35, -23, 16] - process: 39923ab44c15df87
    2024-0306-0713 1110:3905:4928 - PROCESSING.preprocessing[619684] - INFO - Input products: MSG3-SEVI-MSG15-0100-NA-2024030711274220240613095742.143000000Z896000000Z-NA.nat
    2024-0306-0713 1110:3905:4928 - PROCESSING.epct_gis[1452742] - INFO - Expected steps: 6
    2024-0306-0713 1110:3905:4928 - PROCESSING.epct_gis[1454744] - INFO - Starting step "IMPORT" 1/6 ...
    2024-0306-0713 1110:3905:4928 - PROCESSING.vrt[8990] - INFO - Command line and its output ...
     
    gdal_translate -of VRT -a_srs "+proj=geos +h=35785831 +lon_0=0.0 +ellps=GRS80 +no_defs" -a_ullr -5565747.7 5565747.7 5565747.7 -5565747.7 -b 9 -b 10 -b 11  RAD:/usr/local/miniconda/envs/dt_3_3epct-desktop/var/cache/epct/EPCT_HRSEVIRI_FPC_39923ab44c15df87/decompressed_data/MSG3-SEVI-MSG15-0100-NA-2024030711274220240613095742.143000000Z896000000Z-NA.nat /usr/local/miniconda/envs/dt_3_3epct-desktop/var/cache/epct/EPCT_HRSEVIRI_FPC_39923ab44c15df87/MSG3-SEVI-MSG15-0100-NA-2024030711274220240613095742.143000000Z896000000Z-NA.vrt
     
    2024-0306-0713 1110:3905:4928 - PROCESSING.epct_gis[1091397] - INFO - a preliminary ROI is applied to the intermediate VRT
    2024-0306-0713 1110:3905:4928 - PROCESSING.vrt[8990] - INFO - Command line and its output ...
     
    gdalwarp -cutline /usr/local/miniconda/envs/dt_3_3epct-desktop/var/cache/epct/EPCT_HRSEVIRI_FPC_39923ab44c15df87/roi.shp -crop_to_cutline -cblend 10 -r bilinearnear --config OGR_ENABLE_PARTIAL_REPROJECTION YES /usr/local/miniconda/envs/dt_3_3epct-desktop/var/cache/epct/EPCT_HRSEVIRI_FPC_39923ab44c15df87/MSG3-SEVI-MSG15-0100-NA-2024030711274220240613095742.143000000Z896000000Z-NA.vrt /usr/local/miniconda/envs/dt_3_3epct-desktop/var/cache/epct/EPCT_HRSEVIRI_FPC_39923ab44c15df87/MSG3-SEVI-MSG15-0100-NA-2024030711274220240613095742.143000000Z896000000Z-NA_roi.vrt
     
    2024-0306-0713 1110:3905:5028 - PROCESSING.epct_gis[1457747] - INFO - ... step "IMPORT" finished!
    2024-0306-0713 1110:3905:5028 - PROCESSING.epct_gis[1464754] - INFO - Starting step "FILTER" 2/6 ...
    2024-0306-0713 1110:3905:5028 - PROCESSING.epct_gis[1468758] - INFO - ... step "FILTER" finished!
    2024-0306-0713 1110:3905:5028 - PROCESSING.epct_gis[1464754] - INFO - Starting step "INTERMEDIATE_REPROJECTIONPROJECTION" 3/6 ...
    2024-0306-0713 1110:3905:5028 - PROCESSING.vrt[8990] - INFO - Command line and its output ...
     
    gdalwarp -overwrite --config CPL_MAX_ERROR_REPORTS 1 -of GTiff -co BIGTIFF=IF_SAFERIF_SAFER -co COMPRESS=DEFLATE -ot Float32 -t_srs "EPSG:4326" --config THRESHOLD 0.005 -r bilinear -co COMPRESS=DEFLATEnear -srcnodata -1000.0 "/usr/local/miniconda/envs/dt_3_3epct-desktop/var/cache/epct/EPCT_HRSEVIRI_FPC_39923ab44c15df87/MSG3-SEVI-MSG15-0100-NA-2024030711274220240613095742.143000000Z896000000Z-NA_roi.vrt" "/usr/local/miniconda/envs/dt_3_3epct-desktop/var/cache/epct/EPCT_HRSEVIRI_FPC_39923ab44c15df87/intermediate_warped.tif"
     
    2024-0306-0713 1110:3905:5532 - PROCESSING.epct_gis[1134647] - INFO - ... step "INTERMEDIATE_REPROJECTIONPROJECTION" finished!
    2024-0306-0713 1110:3905:5532 - PROCESSING.epct_gis[1464754] - INFO - Starting step "ROI" 4/6 ...
    2024-0306-0713 1110:3905:5532 - PROCESSING.vrt[8990] - INFO - Command line and its output ...
     
    gdalwarp -overwrite --config CPL_MAX_ERROR_REPORTS 1 -te -23.0 35.0 16.0 67.0 -te_srs "EPSG:4326" --config THRESHOLD 0.005 -r bilinearnear "/usr/local/miniconda/envs/dt_3_3epct-desktop/var/cache/epct/EPCT_HRSEVIRI_FPC_39923ab44c15df87/intermediate_warped.tif" "/usr/local/miniconda/envs/dt_3_3epct-desktop/var/cache/epct/EPCT_HRSEVIRI_FPC_39923ab44c15df87/intermediate_warped_cut.tif"
     
    2024-0306-0713 1110:3905:5532 - PROCESSING.epct_gis[1134647] - INFO - ... step "ROI" finished!
    2024-0306-0713 1110:3905:5532 - PROCESSING.epct_gis[1464754] - INFO - Starting step "FORMAT" 5/6 ...
    2024-0306-0713 1110:3905:5532 - PROCESSING.vrt[8990] - INFO - Command line and its output ...
     
    gdal_translate -ot Float32 -of netCDF -co FORMAT=NC4 -ot Float32 "/usr/local/miniconda/envs/dt_3_3epct-desktop/var/cache/epct/EPCT_HRSEVIRI_FPC_39923ab44c15df87/intermediate_warped_cut.tif" "/usr/local/miniconda/envs/dt_3_3epct-desktop/var/cache/epct/EPCT_HRSEVIRI_FPC_39923ab44c15df87/OUTPUTS/EPCT_HRSEVIRI_FPC_39923ab44c15df87.nc"
     
    2024-0306-0713 1110:3905:5532 - PROCESSING.epct_gis[1134647] - INFO - ... step "FORMAT" finished!
    2024-0306-0713 1110:3905:5532 - PROCESSING.postprocessing[468] - INFO - Starting step "POST-PROCESSING" 6/6 ...
    2024-0306-0713 1110:3905:5532 - PROCESSING.postprocessing[493] - INFO - ... step "POST-PROCESSING" finished!
    2024-0306-0713 1110:3905:5532 - PROCESSING.postprocessing[495] - INFO - output-product: ./HRSEVIRI_20240307T111509Z20240613T094510Z_20240307T112742Z20240613T095742Z_epct_39923ab44c15df87_FPC.nc
    2024-0306-0713 1110:3905:5532 - PROCESSING.postprocessing[503] - INFO - customisation time: 97 - process: 39923ab44c15df87
    2024-0306-0713 1110:3905:5532 - PROCESSING.postprocessing[504] - INFO - *** STOP PROCESSING - Status DONE ***
     
    processing-time: 96.48 [sec]
    
Info

The HRSEVIRI product (MSG3-SEVI-MSG15-0100-NA-2024030711274220240613095742.143000000Z896000000Z-NA.zip) is downloaded directly from the Data Store (using eumdac to be specific) and untouched. EUMDAC is included in the Data Tailor standalone instance. An example EUMDAC download command is:

$ eumdac download -c EO:EUM:DAT:MSG:HRSEVIRI --limit 1

Above command is downloading latest available product from HRSEVIRI collection.