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Warning

DRAFT!

ECMWF is updating the default versions of its software packages and libraries used across all user platforms at the centre as part of the regular update cycle.

Info
titleWhen?

The changes will take place on  Wednesday Wednesday 5 May 2021 09:00 UTC


Info
titleWhat platforms are affected?

All user platforms at the centre will see their default additional software stack updated:

  • All clusters in our High Performance Computing Facility, mainly CCA and CCB
  • ECGATE
  • Linux Clusters
  • Linux Desktops
  • TEMS

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For those still using Python 2, note that this major version of Python reached its end of life on 1st January 2020, If you haven't done moved to Python 3.6 yet, please see Migration to Python 3 for some guidance on where to start. We are providing a the latest Python 2.7 for compatibility purposes only.

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ECMWF software improvements

ecCodes, the heart of GRIB and BUFR handling, brings performance improvements, latest WMO GRIB/BUFR tables, contributions from users and several smaller features/bug fixes.

Magics Improvements

Magics, ECMWF's plotting library, brings more improvements:

  • New palettes have been imported from matplotlib and Colorbrewer (https://colorbrewer2.org/) The full list can be found at Predefined palettes in Magics.
  • Improvements have been done on the tilted perspective (tpers) projection allowing now to create nice animations. 
  • Memory leaks have been found and fixed. 

Metview improvements

Metview, ECMWF's interactive and batch software for manipulation and plotting of data, brings a number of fixes for performance and stability, including:

  • fixed issue where the Hovmoeller module's 'expand' option did not work
  • fixed issue that caused a crash when plotting a tephigram using the Stations module for location input
  • performance optimisation in the lookup function - see Fieldset Functions
  • added two new Gallery examples that answer commonly asked questions about setting up curve plotting
  • built with the latest ecCodes and Magics, Metview will of course inherit their improvements, and the new Magics palettes will be available to browse in the Contouring icon's editor
  • more - see the release notes!

Metview's Python interface version 1.6.0 brings new features, including:

See the blog posts for the latest two software releases to learn about what is new in some of our own software packages and libraries such as ecCodes, Magics or Metview.

Potentially disruptive changes in ecCodes

It is worth highligting a number of changes in ecCodes that could have an impact in specific user workflows:

  • The GRIB2 representation of parameter 238 (Temperature of snow layer - tsn) has been modified. See the new encoding here: https://apps-test.ecmwf.int/codes/grib/param-db/?id=238
  • The command codes_info -v no longer outputs a trailing space. Some user scripts may need to be modified.
  • grib_get_data output is slightly modified: Words on the first line are now separated by spaces not commas.
  • The tools now check that the output file is not the same as the input to avoid overwriting/corrupting the source.
  • The MARS keys levtype and levelist have been removed from the GRIB2 templates 4.53 and 4.54.
  • added png driver keyword arguments to setoutput('jupyter') to control output size in notebooks
  • added write(filename) method for classes Fieldset, Geopoints, GeopointSet, Bufr and NetCDF
  • added ability to construct a Fieldset from a list of Fieldsets, e.g. Fieldset([f1, f2, f3])

A lot of other bugfixes and improvements

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Package

Next default

Notes

aec1.0.4

https://gitlab.dkrz.de/k202009/libaec/-/blob/v1.0.4/CHANGELOG.md

boost1.71.0

https://www.boost.org/users/history/version_1_71_0.html

cdo1.9.10

https://code.mpimet.mpg.de/projects/cdo/news

clang11.0.1

https://releases.llvm.org/11.0.1/tools/clang/docs/ReleaseNotes.html

cmake3.19.5https://cmake.org/cmake/help/v3.19/release/3.19.html
cmor3.6.1https://cmor.llnl.gov/news/2020/12/16/cmor3/
ferret7.6.3https://ferret.pmel.noaa.gov/Ferret/documentation/version-763-release-notes
fcm2019.05.0https://github.com/metomi/fcm/blob/master/CHANGES.md
fftw3.3.9http://www.fftw.org/release-notes.html
gdal3.2.1https://github.com/OSGeo/gdal/blob/v3.2.1/gdal/NEWS
geos3.9.1https://github.com/libgeos/geos/blob/3.9.1/NEWS
git2.30.1https://github.com/git/git/tree/master/Documentation/RelNotes
gnuparallel20210222https://savannah.gnu.org/forum/forum.php?forum_id=9943
gsl2.6http://git.savannah.gnu.org/cgit/gsl.git/tree/NEWS
grads2.2.1http://cola.gmu.edu/grads/ChangeLog
grass7.8.5https://grass.osgeo.org/news/2020_12_21_grass_gis_7_8_5_released/
hdf51.10.6https://support.hdfgroup.org/ftp/HDF5/releases/ReleaseFiles/hdf5-1.10.6-RELEASE.txt
nccmp1.8.2.1https://gitlab.com/remikz/nccmp/-/blob/master/README.md
nco4.9.7http://nco.sourceforge.net/ANNOUNCE
ncview2.1.7https://cirrus.ucsd.edu/ncview/
netcdf44.7.4https://www.unidata.ucar.edu/blogs/news/entry/netcdf-4-7-4
ninja1.10.2https://groups.google.com/g/ninja-build/c/oobwq_F0PpA/m/FeJC5LoRBgAJ
octave6.2.0https://www.gnu.org/software/octave/news/release/2021/02/20/octave-6.2.0-released.html
openmpi4.1.0

*not on HPCF

https://raw.githubusercontent.com/open-mpi/ompi/v4.1.x/NEWS

panoply4.12.3https://www.giss.nasa.gov/tools/panoply/
pcraster4.3.0-01https://pcraster.geo.uu.nl
proj7.2.1https://proj.org/news.html#id26
python2.7.17-01

More up-to-date extra python packages

https://docs.python.org/2.7/whatsnew/2.7.html

python33.8.8-01

More up-to-date extra python packages

https://docs.python.org/3.8/whatsnew/3.8.html


R4.0.4

More up-to-date extra R packages

https://cran.r-project.org/doc/manuals/r-release/NEWS.html

udunits2.2.28

https://www.unidata.ucar.edu/software/udunits/CHANGE_LOG

valgrind3.16.1

https://www.valgrind.org/docs/manual/dist.news.html

wgrib23.0.0

https://www.cpc.ncep.noaa.gov/products/wesley/wgrib2/

wreport3.27

https://github.com/ARPA-SIMC/wreport/blob/master/NEWS.md

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